@candig/igv

This is a CanDIG fork of the igv.js, which adds support for Reads and Variants API of candig-server.

igv.js

!build

igv.js is an embeddable interactive genome visualization component developed by the
Integrative Genomics Viewer (IGV) team.

Below are examples and a quickstart guide. See the Wiki for more documentation.

Examples

Alignments

Interactions

Copy number

Multiple regions

Mutation Annotation Format (MAF)

Variant color options

More

Quickstart

Installation

igv.js consists of a single javascript file with no external dependencies.

Pre-built files for ES5 (igv.min.js) and ES6 (igv.esm.min.js)
can be downloaded from https://cdn.jsdelivr.net/npm/igv@2.10.5/dist/.

To import igv as an ES6 module

``javascript
import igv from "https://cdn.jsdelivr.net/npm/igv@2.10.5/dist/igv.esm.min.js"
`

Or as a script include (defines the "igv" global)

`html

`

Alternatively you can install with npm

`npm install igv`

and source the appropriate file for your module system (igv.min.js or igv.esm.min.js) in node_modules/igv/dist.

To use igv.js include it with a script tag

``