biojs-vis-blasterjs

biojs-vis-blasterjs
=====

Authors

* Aitor Blanco Míguez (aiblanco@uvigo.es)
* Dr. Florentino Fernández Riverola (riverola@uvigo.es)
* Dr. Anália Maria Garcia Lourenço (analia@uvigo.es)
* Dr. Borja Sánchez García (borja.sanchez@csic.es)

Description


> A free to use, open source Javascript BLAST alignments viewer library created by SING group.

How to cite

Blanco-Míguez A, Fdez-Riverola F, SánchezB, Lourenço A (2018) BlasterJS: A novel interactive JavaScript visualisation component for BLAST alignment results. PLoS ONE 13(10): e0205286. https://doi.org/10.1371/journal.pone.0205286

Requeriments

* Bootstrap 3 ([http://getbootstrap.com/])
* HTML2CANVAS ([http://html2canvas.hertzen.com/])

Accepted files

BLAST text and XML output files (-outfmt 0 and 5)
> You can check [NCBI BLAST user manual].

Getting Started

Install the module with: npm install biojs-vis-blasterjs

``html


...


...



...




`

$3

Get alignments via String instead of input form:
`html
...

...
`

Define a custom callback on alignment table item click event:
`html
...

...
``

Institution

[© SING - Sistemas Informáticos de Nueva Generación 2015]
Department of Computer Science, University of Vigo
ESEI - Escuela Superior de Ingeniería Informática Edificio politécnico
Campus Universitario As Lagoas s/n
32004 Ourense, Spain
Tel: +34 988 387 013
Fax: +34 988 387 001

Contributing

All contributions are welcome.

Support

If you have any problem or suggestion please open an issue here.

License

[GNU General Public License v3]

BlasterJS is a free to use, open source JS library created by SING Group.
Copyright (C) 2019 SING - Sistemas Informaticos de Nueva Generacion

This program is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.

This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.

You should have received a copy of the GNU General Public License
along with this program. If not, see .

[http://getbootstrap.com/]:
[https://html2canvas.hertzen.com/]:
[© SING - Sistemas Informáticos de Nueva Generación 2019]:
[NCBI BLAST user manual]:
[GNU General Public License v3]: