Time Interval Track for HiGlass

> Display time intervals in the format HH:MM:ss in HiGlass.


!HiGlass showing times

Note: This is the source code for the time interval track only! You might want to check out the following repositories as well:

- HiGlass viewer: https://github.com/hms-dbmi/higlass
- HiGlass server: https://github.com/hms-dbmi/higlass-server
- HiGlass docker: https://github.com/hms-dbmi/higlass-docker

Installation

``
npm install higlass-time-interval-track
`

Usage

1. Make sure you load this track prior to hglib.js. For example:

`



`

2 Make sure that your server is hosting a htime file. This file should contain start, end and length which indicate the start time, end time, and the length of the data points that span that time interval.

`

{
"start": 1527700333497.325,
"end": 1527700926756.7783,
"len": 59340
}
`
This will place the first time interval at data position 0 and the last at data position 59340. Each data point
is thus assumed to last 10 milliseconds.

3. Configure the track in your view config and be happy! Cheers 🎉

`
{
...
{
server: 'http://localhost:8001/api/v1',
tilesetUid: 'time-interval.json',
uid: 'blah',
type: 'time-interval-track',
options: {

},
},
...
}
`

Take a look at src/index.html for an example.

Development

$3

`bash
$ git clone https://github.com/pkerpedjiev/higlass-time-interval-track
$ npm install
`

$3

Developmental server: npm start
Production build: npm run build`