react-mutation-mapper

>

 

Install

``bash
npm install --save react-mutation-mapper
`

Usage

$3

`tsx
import * as React from 'react'

import {LollipopPlot} from 'react-mutation-mapper'

class Example extends React.Component {
render () {
return (
lollipops={[
{codon: 36, count: 6, color: "#6600AA"},
{codon: 366, count: 4, color: "#00AAFF"},
{codon: 606, count: 8, color: "#AA0066"}
]}
domains={[
{startCodon: 6, endCodon: 66, color: "#FF9900", label: "D1"},
{startCodon: 566, endCodon: 616, color: "#0044CC", label: "D2"}
]}
vizWidth={640}
vizHeight={200}
xMax={666}
yMax={10}
/>
)
}
}
`

$3

`tsx
import * as React from 'react'

import {
DefaultMutationMapperStore, LollipopMutationPlot
} from 'react-mutation-mapper'

class Example extends React.Component {
render () {
return (
store={
new DefaultMutationMapperStore(
{hugoGeneSymbol: "TP53", entrezGeneId: 7157},
{isoformOverrideSource: "mskcc", filterMutationsBySelectedTranscript: true},
() => [{
chromosome: "17",
startPosition: 41246256,
endPosition: 41246256,
proteinChange: "V6E",
proteinPosEnd: 6,
proteinPosStart: 6,
referenceAllele: "G",
variantAllele: "T",
mutationType: "missense"
}, {
chromosome: "17",
startPosition: 41246666,
endPosition: 41246666,
proteinChange: "V66E",
proteinPosEnd: 66,
proteinPosStart: 66,
referenceAllele: "A",
variantAllele: "C",
mutationType: "inframe_del"
}])
}
geneWidth={666}
/>
)
}
}
``

License

© cBioPortal